Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908841.1_cds_XP_016459036.1_52600
CDS Infomation

[gene=LOC107782652] [db_xref=GeneID:107782652] [protein=uncharacterized protein LOC107782652 isoform X3] [protein_id=XP_016459036.1] [location=join(65252..65265,67661..67759,68041..68148,69394..69548,69627..69715,69803..70340,70750..70860,71623..71861,71951..72033,72331..72442,72528..72602,72685..72861)] [gbkey=CDS]
Sequence

ATGGAACCGTTAGAGTTTGGAACACAAGTAGTGGAAGCCTATTTGCTCAGTGGAAACCGG
AGAATTCTGGAGACAGTTTTTCTTACATGGCTTGCGGTTTTGTTGGAAAGAAGAAAAGAA
CAACGTTTATTAATAGCCCTTGGCGCAGATGATGGAACTGTTTTAGCAGTTGATATCTCT
GCTGAATTAATGAGGTGGAGAAAAGCTGGAGCCCTTTCCAGTGGAGCTGCTGGTCTGTTT
TTTGTGGACAAAGCCCGTAAGATTCATGCTGTTGCTGCGAATGGTTTAGTATTTGAGATG
AACTCTGACACTGGAGAAGTCATCAAAGAGTTCAAAGTGTCAAAGAAGCCCTTTTCCTCA
GTGGCTCATTCAACTGACGAGAAAATTATAGCTGCAGCCAGTGATAAGTTACGATTTCTA
AGTTTAGAAAGTGGGAAAGAGTTGCTGAAGTTGTCTCCTGCCTCGGCTGTTGCACAGCGT
TTATGGCTATCTGATGATGCCCAATTTGCTGTTACTGCTGGGCTTGGCGAGAGGCAACTT
CAAGTGTGGAAACTTGATTTTGGTGAAAGGGCTGCAGATTATGGGCAGGTTCTTTCCATG
AAACATCCTCCTATAATTGTTGAGTGCAGGAAAAATTGCAAGGGAGAAGACGGTATGGTT
GTCCTTGCAATATCAGAGAAGGGTGTTTGTTATGTTTGGAACTTTGAGTCTGTCACTGAT
GAAGTTGTAAAGCCAATTAAGATCACTGTAAAAGCTAGCAAAGGGGAAACAGAAAAGAAA
ACTGGAAGAGCAAAAAAGAACATTGCGCCCATAATTGCTGCCAGGTTGCATGTTTTGGAC
AGAGATGCTCATTTGAGGGCCTTGATTGCATATGGCTCTGTGGAATCCCCAGAGTTTACA
TCAGTAGACATTTCAAGTCCAGGGGAGGATATCGTCATAGCAGCAGTAGACCAGGCCGAG
AAAGTGCTTGCTGCAGTTCAAGAAAATGGTCATGCCAGAAAAGGTGCAGATATGGAAAAC
GAAGGTGTTAAATTAATCCAGAAAAGCAAAGTGACGAATAAACGACCAGCATCTGATCTG
GATGTCACTCCACCAGTGACAATCACAGATGATGGTAATGGTGAACCTATAGATGGAGTT
CAGATTGATGATCTAAACGAGCCGACCATGGGTGAGAAACTCGCGAGGCTCCATTTGGCA
GACAACAATGAAGATAAAAGCAATGAGGATCTAGAATCTCCTCCTCAAACAAAGCCTCCA
AGTGCTGATTCAGTTCATGTTCTGCTCAAGCAAGCCCTTCATGCTGATGATCGAGCACTT
TTGATAGATTGCTTATACAGACAAGATGAGAAGGTCATTGCAAATTCAGTATCTCTTTTA
AATCCATCAGATGTTCTCAAGCTTTTACAGTCACTCTTGTCAATTATCCAGTCAAGGGGC
GCTGTATTGGCTTGTGCCCTTCCCTGGTTGCAAAGTTTACTTCTTCAACACGCTAGTGGA
ATAATGTCTCAAGAATCCTCTTTGCTTGTACTCAACTCTTTATATCAGCTTATTGATGCC
AGACTTTCAACTCTCCACCAAGCTCTTCAGCTATCAAGCTCCTTAGAATTGCTTTATGCA
GGGACTATTGATGATGGTGATGAGGAAGATGGTGCCATACAGCCTATCATCTATGAAGAT
GAAAGTGACGAGGAGGGTTCTGAAGTTGCTATGGAAACGGAAAGCAACCCAGATGTTGAG
GAACCAGAGGCTTTTAGTGACATTAGTGATCACGGATTGAGTGATGGCATGAGCGAGTGA

Peptide Sequence

PEP ID

XP_016459036.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107782652 isoform X3 [Nicotiana tabacum]
Sequence

MEPLEFGTQVVEAYLLSGNRRILETVFLTWLAVLLERRKEQRLLIALGADDGTVLAVDIS
AELMRWRKAGALSSGAAGLFFVDKARKIHAVAANGLVFEMNSDTGEVIKEFKVSKKPFSS
VAHSTDEKIIAAASDKLRFLSLESGKELLKLSPASAVAQRLWLSDDAQFAVTAGLGERQL
QVWKLDFGERAADYGQVLSMKHPPIIVECRKNCKGEDGMVVLAISEKGVCYVWNFESVTD
EVVKPIKITVKASKGETEKKTGRAKKNIAPIIAARLHVLDRDAHLRALIAYGSVESPEFT
SVDISSPGEDIVIAAVDQAEKVLAAVQENGHARKGADMENEGVKLIQKSKVTNKRPASDL
DVTPPVTITDDGNGEPIDGVQIDDLNEPTMGEKLARLHLADNNEDKSNEDLESPPQTKPP
SADSVHVLLKQALHADDRALLIDCLYRQDEKVIANSVSLLNPSDVLKLLQSLLSIIQSRG
AVLACALPWLQSLLLQHASGIMSQESSLLVLNSLYQLIDARLSTLHQALQLSSSLELLYA
GTIDDGDEEDGAIQPIIYEDESDEEGSEVAMETESNPDVEEPEAFSDISDHGLSDGMSE

Transcript Sequence

Gene sequence data has not been registered.